Here's how to merge notebooks in Gemini Notebook, formerly NotebookLM, into one new notebook, with Kortex. Open the Kortex Workspace with the Dashboard button in the side panel. Then choose Merge Notebooks in the sidebar, under Tools.
Type a name in New Notebook Name. The merge makes a new notebook, so pick a name that's different from the originals. Tick the notebooks to combine.
Use the filter box to find them. Switch on Delete originals only if you want to remove the old notebooks. If you're not sure, leave it off.
Click Merge and confirm. A merge can't be undone. When it finishes, Merge Complete shows the new notebook's name and its number of sources.
To see how two notebooks overlap first, tick two in the Notebooks table and choose Compare. Shared sources show in green. Merge your notebooks into one new notebook.